Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vamp8O70404 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vamp8O70404 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vamp8O70404 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vamp8O70404 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vamp8O70404 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.05□□□□□ -0.32
Vamp8O70404 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vamp8O70404 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vamp8O70404 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.05□□□□□ -0.32
Vamp8O70404 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vamp8O70404 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vamp8O70404 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vamp8O70404 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.04□□□□□ -0.32
Vamp8O70404 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Vamp8O70404 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.04□□□□□ -0.32
Vamp8O70404 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vamp8O70404 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.04□□□□□ -0.32
Vamp8O70404 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Vamp8O70404 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vamp8O70404 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vamp8O70404 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
Vamp8O70404 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vamp8O70404 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Mir6236-201ENSMUST00000184437 123 ntBASIC13.03□□□□□ -0.32
Vamp8O70404 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vamp8O70404 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vamp8O70404 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.03□□□□□ -0.32
Vamp8O70404 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vamp8O70404 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp8O70404 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp8O70404 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.02□□□□□ -0.32
Vamp8O70404 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.02□□□□□ -0.32
Vamp8O70404 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp8O70404 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vamp8O70404 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Vamp8O70404 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vamp8O70404 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.02□□□□□ -0.33
Vamp8O70404 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vamp8O70404 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vamp8O70404 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms