Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Hdac1O09106 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hdac1O09106 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hdac1O09106 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hdac1O09106 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hdac1O09106 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC22.02■■□□□ 1.12
Hdac1O09106 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Hdac1O09106 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
Hdac1O09106 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Hdac1O09106 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hdac1O09106 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC22.02■■□□□ 1.12
Hdac1O09106 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Hdac1O09106 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Hdac1O09106 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC22.02■■□□□ 1.11
Hdac1O09106 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Hdac1O09106 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hdac1O09106 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Hdac1O09106 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.01■■□□□ 1.11
Hdac1O09106 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC22.01■■□□□ 1.11
Hdac1O09106 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hdac1O09106 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC22.01■■□□□ 1.11
Hdac1O09106 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
Hdac1O09106 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
Hdac1O09106 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hdac1O09106 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hdac1O09106 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
Hdac1O09106 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Gm8309-201ENSMUST00000206627 1448 ntBASIC22■■□□□ 1.11
Hdac1O09106 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
Hdac1O09106 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22■■□□□ 1.11
Hdac1O09106 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22■■□□□ 1.11
Hdac1O09106 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22■■□□□ 1.11
Hdac1O09106 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hdac1O09106 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Hdac1O09106 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hdac1O09106 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hdac1O09106 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Hdac1O09106 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hdac1O09106 Gm6139-201ENSMUST00000079261 882 ntBASIC21.99■■□□□ 1.11
Hdac1O09106 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hdac1O09106 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hdac1O09106 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.99■■□□□ 1.11
Hdac1O09106 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hdac1O09106 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.98■■□□□ 1.11
Hdac1O09106 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.98■■□□□ 1.11
Hdac1O09106 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hdac1O09106 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.98■■□□□ 1.11
Hdac1O09106 Gm40848-201ENSMUST00000221998 324 ntBASIC21.98■■□□□ 1.11
Hdac1O09106 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hdac1O09106 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hdac1O09106 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.98■■□□□ 1.11
Hdac1O09106 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Hdac1O09106 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.97■■□□□ 1.11
Hdac1O09106 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.97■■□□□ 1.11
Hdac1O09106 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hdac1O09106 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.97■■□□□ 1.11
Hdac1O09106 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.96■■□□□ 1.11
Hdac1O09106 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hdac1O09106 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Hdac1O09106 Gm26833-201ENSMUST00000180899 440 ntBASIC21.96■■□□□ 1.11
Hdac1O09106 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hdac1O09106 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Hdac1O09106 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Hdac1O09106 Tgds-204ENSMUST00000228543 1594 ntBASIC21.95■■□□□ 1.11
Hdac1O09106 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.95■■□□□ 1.1
Hdac1O09106 Gm27454-201ENSMUST00000185090 204 ntBASIC21.95■■□□□ 1.1
Hdac1O09106 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hdac1O09106 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms