Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hps1O08983 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.06■□□□□ 0.32
Hps1O08983 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Gm27011-201ENSMUST00000182352 972 ntBASIC17.06■□□□□ 0.32
Hps1O08983 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Spcs1-204ENSMUST00000226782 949 ntBASIC17.06■□□□□ 0.32
Hps1O08983 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hps1O08983 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.05■□□□□ 0.32
Hps1O08983 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.05■□□□□ 0.32
Hps1O08983 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hps1O08983 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hps1O08983 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hps1O08983 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hps1O08983 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Hps1O08983 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hps1O08983 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hps1O08983 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Gm40848-201ENSMUST00000221998 324 ntBASIC17.04■□□□□ 0.32
Hps1O08983 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.04■□□□□ 0.32
Hps1O08983 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.04■□□□□ 0.32
Hps1O08983 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hps1O08983 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hps1O08983 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps1O08983 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Hps1O08983 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.03■□□□□ 0.32
Hps1O08983 Gm10849-201ENSMUST00000100397 618 ntBASIC17.03■□□□□ 0.32
Hps1O08983 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hps1O08983 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hps1O08983 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Hps1O08983 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.02■□□□□ 0.32
Hps1O08983 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hps1O08983 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.02■□□□□ 0.32
Hps1O08983 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.02■□□□□ 0.32
Hps1O08983 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps1O08983 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hps1O08983 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps1O08983 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 265.3 ms