Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Gm26524-201ENSMUST00000192339 390 ntBASIC21.66■■□□□ 1.06
Usp42B2RQC2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Usp42B2RQC2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Usp42B2RQC2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.66■■□□□ 1.06
Usp42B2RQC2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Usp42B2RQC2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp42B2RQC2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Usp42B2RQC2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp42B2RQC2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.64■■□□□ 1.05
Usp42B2RQC2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp42B2RQC2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp42B2RQC2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp42B2RQC2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Usp42B2RQC2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Gm22325-201ENSMUST00000158904 308 ntBASIC21.62■■□□□ 1.05
Usp42B2RQC2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp42B2RQC2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp42B2RQC2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp42B2RQC2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.61■■□□□ 1.05
Usp42B2RQC2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp42B2RQC2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp42B2RQC2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp42B2RQC2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Usp42B2RQC2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Usp42B2RQC2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp42B2RQC2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Usp42B2RQC2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Gm10602-201ENSMUST00000098239 609 ntBASIC21.59■■□□□ 1.05
Usp42B2RQC2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp42B2RQC2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.58■■□□□ 1.05
Usp42B2RQC2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Usp42B2RQC2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Usp42B2RQC2 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.58■■□□□ 1.05
Usp42B2RQC2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp42B2RQC2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp42B2RQC2 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.58■■□□□ 1.05
Usp42B2RQC2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.58■■□□□ 1.05
Usp42B2RQC2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.58■■□□□ 1.04
Usp42B2RQC2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Usp42B2RQC2 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.58■■□□□ 1.04
Usp42B2RQC2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms