Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
4933424G06RikA0A140LIP3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933424G06RikA0A140LIP3 Dio3-201ENSMUST00000097228 1449 ntBASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933424G06RikA0A140LIP3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933424G06RikA0A140LIP3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933424G06RikA0A140LIP3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
4933424G06RikA0A140LIP3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
4933424G06RikA0A140LIP3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
4933424G06RikA0A140LIP3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
4933424G06RikA0A140LIP3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.78■□□□□ 0.6
4933424G06RikA0A140LIP3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
4933424G06RikA0A140LIP3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.78■□□□□ 0.6
4933424G06RikA0A140LIP3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
4933424G06RikA0A140LIP3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms