Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.67□□□□□ -0.06
Trav17A0A075B655 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.67□□□□□ -0.06
Trav17A0A075B655 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav17A0A075B655 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav17A0A075B655 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.65□□□□□ -0.06
Trav17A0A075B655 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Spcs1-204ENSMUST00000226782 949 ntBASIC14.65□□□□□ -0.06
Trav17A0A075B655 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.65□□□□□ -0.06
Trav17A0A075B655 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav17A0A075B655 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Gm12922-201ENSMUST00000120626 809 ntBASIC14.64□□□□□ -0.07
Trav17A0A075B655 Gm7860-201ENSMUST00000121190 879 ntBASIC14.64□□□□□ -0.07
Trav17A0A075B655 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.64□□□□□ -0.07
Trav17A0A075B655 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.64□□□□□ -0.07
Trav17A0A075B655 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.64□□□□□ -0.07
Trav17A0A075B655 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav17A0A075B655 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav17A0A075B655 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms