Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Gm15039-201ENSMUST00000118914 875 ntBASIC16.41■□□□□ 0.22
Trav10A0A075B642 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.41■□□□□ 0.22
Trav10A0A075B642 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Trav10A0A075B642 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav10A0A075B642 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.39■□□□□ 0.21
Trav10A0A075B642 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav10A0A075B642 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Gm7514-201ENSMUST00000209475 934 ntBASIC16.38■□□□□ 0.21
Trav10A0A075B642 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav10A0A075B642 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav10A0A075B642 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Gm26571-201ENSMUST00000181399 666 ntBASIC16.37■□□□□ 0.21
Trav10A0A075B642 Gm6420-201ENSMUST00000193885 723 ntBASIC16.37■□□□□ 0.21
Trav10A0A075B642 AV356131-201ENSMUST00000206201 750 ntBASIC16.37■□□□□ 0.21
Trav10A0A075B642 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.37■□□□□ 0.21
Trav10A0A075B642 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav10A0A075B642 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Nespas-201ENSMUST00000143738 1083 ntBASIC16.36■□□□□ 0.21
Trav10A0A075B642 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav10A0A075B642 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav10A0A075B642 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav10A0A075B642 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav10A0A075B642 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav10A0A075B642 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms