Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Upb1Q8VC97 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.14■□□□□ 0.81
Upb1Q8VC97 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upb1Q8VC97 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upb1Q8VC97 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upb1Q8VC97 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upb1Q8VC97 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Gm22325-201ENSMUST00000158904 308 ntBASIC20.11■□□□□ 0.81
Upb1Q8VC97 Gm8520-201ENSMUST00000186517 868 ntBASIC20.11■□□□□ 0.81
Upb1Q8VC97 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.11■□□□□ 0.81
Upb1Q8VC97 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.11■□□□□ 0.81
Upb1Q8VC97 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Upb1Q8VC97 Dio3-201ENSMUST00000097228 1449 ntBASIC20.1■□□□□ 0.81
Upb1Q8VC97 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.1■□□□□ 0.81
Upb1Q8VC97 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.1■□□□□ 0.81
Upb1Q8VC97 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upb1Q8VC97 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.09■□□□□ 0.81
Upb1Q8VC97 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Gm27275-201ENSMUST00000184318 272 ntBASIC20.09■□□□□ 0.81
Upb1Q8VC97 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upb1Q8VC97 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 Gm2399-201ENSMUST00000104944 225 ntBASIC20.08■□□□□ 0.81
Upb1Q8VC97 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upb1Q8VC97 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upb1Q8VC97 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Upb1Q8VC97 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Upb1Q8VC97 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Gm13168-201ENSMUST00000121771 632 ntBASIC20.06■□□□□ 0.8
Upb1Q8VC97 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Upb1Q8VC97 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Upb1Q8VC97 Gm22240-201ENSMUST00000175225 82 ntBASIC20.05■□□□□ 0.8
Upb1Q8VC97 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms