Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 Gm10252-201ENSMUST00000209541 832 ntBASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.48■□□□□ 0.87
Smchd1Q6P5D8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smchd1Q6P5D8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smchd1Q6P5D8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Gm10698-201ENSMUST00000182663 604 ntBASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Iqck-206ENSMUST00000208658 2891 ntBASIC20.45■□□□□ 0.86
Smchd1Q6P5D8 Gm11927-201ENSMUST00000118472 759 ntBASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smchd1Q6P5D8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Gm13158-201ENSMUST00000122007 736 ntBASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.43■□□□□ 0.86
Smchd1Q6P5D8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smchd1Q6P5D8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Zfp783-201ENSMUST00000095946 670 ntBASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smchd1Q6P5D8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Gm10812-201ENSMUST00000099864 546 ntBASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smchd1Q6P5D8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms