Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Scube3Q66PY1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.45■□□□□ 0.7
Scube3Q66PY1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.45■□□□□ 0.7
Scube3Q66PY1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.45■□□□□ 0.7
Scube3Q66PY1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scube3Q66PY1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.44■□□□□ 0.7
Scube3Q66PY1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.44■□□□□ 0.7
Scube3Q66PY1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.44■□□□□ 0.7
Scube3Q66PY1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.44■□□□□ 0.7
Scube3Q66PY1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Scube3Q66PY1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scube3Q66PY1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.43■□□□□ 0.7
Scube3Q66PY1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scube3Q66PY1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.42■□□□□ 0.7
Scube3Q66PY1 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.42■□□□□ 0.7
Scube3Q66PY1 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.42■□□□□ 0.7
Scube3Q66PY1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scube3Q66PY1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Scube3Q66PY1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Gm5408-201ENSMUST00000197998 747 ntBASIC19.41■□□□□ 0.7
Scube3Q66PY1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scube3Q66PY1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.4■□□□□ 0.7
Scube3Q66PY1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.4■□□□□ 0.7
Scube3Q66PY1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scube3Q66PY1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.4■□□□□ 0.7
Scube3Q66PY1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.4■□□□□ 0.7
Scube3Q66PY1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Scube3Q66PY1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Scube3Q66PY1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms