Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Znf235Q61116 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.47■□□□□ 0.71
Znf235Q61116 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.47■□□□□ 0.71
Znf235Q61116 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Znf235Q61116 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Znf235Q61116 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.46■□□□□ 0.71
Znf235Q61116 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.46■□□□□ 0.71
Znf235Q61116 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Znf235Q61116 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Znf235Q61116 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Znf235Q61116 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.46■□□□□ 0.71
Znf235Q61116 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Flg-201ENSMUST00000050758 1488 ntBASIC19.46■□□□□ 0.71
Znf235Q61116 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Znf235Q61116 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.45■□□□□ 0.7
Znf235Q61116 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Znf235Q61116 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.45■□□□□ 0.7
Znf235Q61116 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 Zfp783-201ENSMUST00000095946 670 ntBASIC19.45■□□□□ 0.7
Znf235Q61116 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.45■□□□□ 0.7
Znf235Q61116 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Znf235Q61116 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.45■□□□□ 0.7
Znf235Q61116 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.45■□□□□ 0.7
Znf235Q61116 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.45■□□□□ 0.7
Znf235Q61116 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Znf235Q61116 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.44■□□□□ 0.7
Znf235Q61116 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.44■□□□□ 0.7
Znf235Q61116 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Znf235Q61116 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Gm10812-201ENSMUST00000099864 546 ntBASIC19.44■□□□□ 0.7
Znf235Q61116 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf235Q61116 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Znf235Q61116 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.43■□□□□ 0.7
Znf235Q61116 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Znf235Q61116 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Znf235Q61116 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.43■□□□□ 0.7
Znf235Q61116 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Znf235Q61116 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf235Q61116 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf235Q61116 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.43■□□□□ 0.7
Znf235Q61116 Gm13158-201ENSMUST00000122007 736 ntBASIC19.43■□□□□ 0.7
Znf235Q61116 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.43■□□□□ 0.7
Znf235Q61116 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf235Q61116 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.43■□□□□ 0.7
Znf235Q61116 Gm18666-201ENSMUST00000190039 958 ntBASIC19.43■□□□□ 0.7
Znf235Q61116 Mtag2-201ENSMUST00000058665 714 ntBASIC19.43■□□□□ 0.7
Znf235Q61116 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Znf235Q61116 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf235Q61116 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Znf235Q61116 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf235Q61116 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Znf235Q61116 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.42■□□□□ 0.7
Znf235Q61116 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.42■□□□□ 0.7
Znf235Q61116 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Znf235Q61116 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf235Q61116 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.41■□□□□ 0.7
Znf235Q61116 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf235Q61116 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms