Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkx6-3Q3UHX8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx6-3Q3UHX8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Gm12527-201ENSMUST00000117967 564 ntBASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx6-3Q3UHX8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx6-3Q3UHX8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx6-3Q3UHX8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Nkx6-3Q3UHX8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm27011-201ENSMUST00000182352 972 ntBASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm44549-201ENSMUST00000208351 577 ntBASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Gm20049-201ENSMUST00000219950 730 ntBASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx6-3Q3UHX8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nkx6-3Q3UHX8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx6-3Q3UHX8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms