Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc4a4O88343 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc4a4O88343 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc4a4O88343 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.9■■□□□ 1.1
Slc4a4O88343 Gm10653-202ENSMUST00000139570 835 ntBASIC21.9■■□□□ 1.1
Slc4a4O88343 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Slc4a4O88343 Gm20049-201ENSMUST00000219950 730 ntBASIC21.9■■□□□ 1.1
Slc4a4O88343 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc4a4O88343 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Slc4a4O88343 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.89■■□□□ 1.1
Slc4a4O88343 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Slc4a4O88343 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc4a4O88343 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Slc4a4O88343 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc4a4O88343 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc4a4O88343 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.89■■□□□ 1.09
Slc4a4O88343 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc4a4O88343 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.89■■□□□ 1.09
Slc4a4O88343 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.89■■□□□ 1.09
Slc4a4O88343 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Slc4a4O88343 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc4a4O88343 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Slc4a4O88343 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Slc4a4O88343 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.88■■□□□ 1.09
Slc4a4O88343 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Slc4a4O88343 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc4a4O88343 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Slc4a4O88343 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc4a4O88343 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.87■■□□□ 1.09
Slc4a4O88343 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc4a4O88343 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc4a4O88343 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Slc4a4O88343 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.87■■□□□ 1.09
Slc4a4O88343 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc4a4O88343 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Slc4a4O88343 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Slc4a4O88343 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Slc4a4O88343 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc4a4O88343 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc4a4O88343 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Slc4a4O88343 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc4a4O88343 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.86■■□□□ 1.09
Slc4a4O88343 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.86■■□□□ 1.09
Slc4a4O88343 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.86■■□□□ 1.09
Slc4a4O88343 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc4a4O88343 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc4a4O88343 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Slc4a4O88343 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.85■■□□□ 1.09
Slc4a4O88343 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Slc4a4O88343 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.85■■□□□ 1.09
Slc4a4O88343 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc4a4O88343 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc4a4O88343 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slc4a4O88343 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc4a4O88343 BC021767-201ENSMUST00000126387 1716 ntBASIC21.84■■□□□ 1.09
Slc4a4O88343 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc4a4O88343 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Slc4a4O88343 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slc4a4O88343 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slc4a4O88343 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Slc4a4O88343 Gm44549-201ENSMUST00000208351 577 ntBASIC21.84■■□□□ 1.09
Slc4a4O88343 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc4a4O88343 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Slc4a4O88343 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc4a4O88343 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Slc4a4O88343 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc4a4O88343 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Slc4a4O88343 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc4a4O88343 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Slc4a4O88343 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Slc4a4O88343 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Slc4a4O88343 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Slc4a4O88343 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc4a4O88343 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc4a4O88343 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc4a4O88343 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc4a4O88343 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Slc4a4O88343 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc4a4O88343 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Slc4a4O88343 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 120.3 ms