Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav17A0A075B655 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav17A0A075B655 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.73□□□□□ -0.05
Trav17A0A075B655 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Trav17A0A075B655 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.72□□□□□ -0.05
Trav17A0A075B655 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav17A0A075B655 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav17A0A075B655 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav17A0A075B655 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.7□□□□□ -0.06
Trav17A0A075B655 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav17A0A075B655 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.7□□□□□ -0.06
Trav17A0A075B655 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav17A0A075B655 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav17A0A075B655 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav17A0A075B655 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.69□□□□□ -0.06
Trav17A0A075B655 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav17A0A075B655 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.68□□□□□ -0.06
Trav17A0A075B655 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Trav17A0A075B655 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms