Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav10A0A075B642 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav10A0A075B642 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.47■□□□□ 0.23
Trav10A0A075B642 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav10A0A075B642 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.46■□□□□ 0.23
Trav10A0A075B642 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.46■□□□□ 0.23
Trav10A0A075B642 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.46■□□□□ 0.23
Trav10A0A075B642 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav10A0A075B642 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav10A0A075B642 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav10A0A075B642 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Gm18671-201ENSMUST00000214826 683 ntBASIC16.45■□□□□ 0.22
Trav10A0A075B642 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.45■□□□□ 0.22
Trav10A0A075B642 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav10A0A075B642 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav10A0A075B642 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav10A0A075B642 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav10A0A075B642 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Gm18284-201ENSMUST00000172604 624 ntBASIC16.43■□□□□ 0.22
Trav10A0A075B642 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Gm10033-202ENSMUST00000211874 928 ntBASIC16.43■□□□□ 0.22
Trav10A0A075B642 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav10A0A075B642 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.42■□□□□ 0.22
Trav10A0A075B642 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Gm13534-201ENSMUST00000121169 513 ntBASIC16.42■□□□□ 0.22
Trav10A0A075B642 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav10A0A075B642 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav10A0A075B642 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms