Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Upb1Q8VC97 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.22■□□□□ 0.83
Upb1Q8VC97 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Gm44549-201ENSMUST00000208351 577 ntBASIC20.21■□□□□ 0.83
Upb1Q8VC97 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.21■□□□□ 0.83
Upb1Q8VC97 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Upb1Q8VC97 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.2■□□□□ 0.82
Upb1Q8VC97 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Upb1Q8VC97 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Upb1Q8VC97 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Upb1Q8VC97 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upb1Q8VC97 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upb1Q8VC97 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.19■□□□□ 0.82
Upb1Q8VC97 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Upb1Q8VC97 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Gm2559-201ENSMUST00000201323 363 ntBASIC20.18■□□□□ 0.82
Upb1Q8VC97 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Upb1Q8VC97 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Gm37856-201ENSMUST00000191634 999 ntBASIC20.17■□□□□ 0.82
Upb1Q8VC97 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Upb1Q8VC97 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Upb1Q8VC97 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upb1Q8VC97 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upb1Q8VC97 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.16■□□□□ 0.82
Upb1Q8VC97 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upb1Q8VC97 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Upb1Q8VC97 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Gm12896-201ENSMUST00000118430 226 ntBASIC20.15■□□□□ 0.82
Upb1Q8VC97 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Trmt13-210ENSMUST00000198454 880 ntBASIC20.15■□□□□ 0.82
Upb1Q8VC97 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Upb1Q8VC97 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Upb1Q8VC97 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Upb1Q8VC97 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Upb1Q8VC97 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Upb1Q8VC97 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upb1Q8VC97 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upb1Q8VC97 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Upb1Q8VC97 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upb1Q8VC97 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms