Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trappc6aQ78XR0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Gm15565-201ENSMUST00000118890 427 ntBASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trappc6aQ78XR0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trappc6aQ78XR0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Gm37055-201ENSMUST00000191866 133 ntBASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trappc6aQ78XR0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trappc6aQ78XR0 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.39■□□□□ 0.54
Trappc6aQ78XR0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trappc6aQ78XR0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Mir1199-201ENSMUST00000117015 119 ntBASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trappc6aQ78XR0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.38■□□□□ 0.53
Trappc6aQ78XR0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms