Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shroom1Q5SX79 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shroom1Q5SX79 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Shroom1Q5SX79 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.74■□□□□ 0.75
Shroom1Q5SX79 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shroom1Q5SX79 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Gm10252-201ENSMUST00000209541 832 ntBASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shroom1Q5SX79 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms