Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim43aQ3TL54 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.68■□□□□ 0.74
Trim43aQ3TL54 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43aQ3TL54 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Spcs1-204ENSMUST00000226782 949 ntBASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43aQ3TL54 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Trim43aQ3TL54 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Gm7860-201ENSMUST00000121190 879 ntBASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Gm43137-201ENSMUST00000198052 594 ntBASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43aQ3TL54 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43aQ3TL54 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Trim43aQ3TL54 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43aQ3TL54 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Trim43aQ3TL54 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43aQ3TL54 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43aQ3TL54 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43aQ3TL54 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms