Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col10a1Q05306 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Col10a1Q05306 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col10a1Q05306 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col10a1Q05306 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col10a1Q05306 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col10a1Q05306 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.12■□□□□ 0.33
Col10a1Q05306 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.12■□□□□ 0.33
Col10a1Q05306 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.12■□□□□ 0.33
Col10a1Q05306 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.12■□□□□ 0.33
Col10a1Q05306 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Col10a1Q05306 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col10a1Q05306 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col10a1Q05306 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col10a1Q05306 BC021767-201ENSMUST00000126387 1716 ntBASIC17.11■□□□□ 0.33
Col10a1Q05306 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.11■□□□□ 0.33
Col10a1Q05306 Gm37179-201ENSMUST00000194862 823 ntBASIC17.11■□□□□ 0.33
Col10a1Q05306 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.11■□□□□ 0.33
Col10a1Q05306 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col10a1Q05306 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Golph3-205ENSMUST00000228671 2842 ntBASIC17.11■□□□□ 0.33
Col10a1Q05306 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Col10a1Q05306 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col10a1Q05306 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col10a1Q05306 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Col10a1Q05306 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col10a1Q05306 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.1■□□□□ 0.33
Col10a1Q05306 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.1■□□□□ 0.33
Col10a1Q05306 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col10a1Q05306 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col10a1Q05306 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col10a1Q05306 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col10a1Q05306 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Col10a1Q05306 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col10a1Q05306 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col10a1Q05306 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col10a1Q05306 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col10a1Q05306 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.08■□□□□ 0.32
Col10a1Q05306 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.08■□□□□ 0.32
Col10a1Q05306 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Col10a1Q05306 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.08■□□□□ 0.32
Col10a1Q05306 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col10a1Q05306 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.07■□□□□ 0.32
Col10a1Q05306 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.07■□□□□ 0.32
Col10a1Q05306 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.07■□□□□ 0.32
Col10a1Q05306 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col10a1Q05306 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms