Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pfdn6Q03958 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Pfdn6Q03958 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pfdn6Q03958 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pfdn6Q03958 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.64■□□□□ 0.57
Pfdn6Q03958 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pfdn6Q03958 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pfdn6Q03958 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Gm38205-201ENSMUST00000192243 258 ntBASIC18.63■□□□□ 0.57
Pfdn6Q03958 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pfdn6Q03958 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.62■□□□□ 0.57
Pfdn6Q03958 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pfdn6Q03958 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pfdn6Q03958 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.6■□□□□ 0.57
Pfdn6Q03958 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pfdn6Q03958 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.6■□□□□ 0.57
Pfdn6Q03958 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pfdn6Q03958 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pfdn6Q03958 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms