Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm42545-201ENSMUST00000202755 922 ntBASIC27.32■■□□□ 1.96
Kdm5cP41230 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
Kdm5cP41230 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
Kdm5cP41230 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Kdm5cP41230 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC27.31■■□□□ 1.96
Kdm5cP41230 Gm6728-201ENSMUST00000178117 1065 ntBASIC27.31■■□□□ 1.96
Kdm5cP41230 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Kdm5cP41230 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Kdm5cP41230 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC27.31■■□□□ 1.96
Kdm5cP41230 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Kdm5cP41230 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Kdm5cP41230 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Kdm5cP41230 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Kdm5cP41230 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
Kdm5cP41230 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Kdm5cP41230 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Kdm5cP41230 AC124581.1-201ENSMUST00000225416 1399 ntBASIC27.29■■□□□ 1.96
Kdm5cP41230 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC27.29■■□□□ 1.96
Kdm5cP41230 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Kdm5cP41230 Gm7712-202ENSMUST00000222331 1510 ntBASIC27.29■■□□□ 1.96
Kdm5cP41230 Gm12382-201ENSMUST00000122005 922 ntBASIC27.29■■□□□ 1.96
Kdm5cP41230 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Kdm5cP41230 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Kdm5cP41230 Gm37352-201ENSMUST00000193908 2181 ntBASIC27.29■■□□□ 1.96
Kdm5cP41230 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Kdm5cP41230 Gm45640-201ENSMUST00000210665 1896 ntBASIC27.28■■□□□ 1.96
Kdm5cP41230 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Kdm5cP41230 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Kdm5cP41230 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Kdm5cP41230 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Kdm5cP41230 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Kdm5cP41230 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Kdm5cP41230 Hsf1-207ENSMUST00000228371 2102 ntBASIC27.28■■□□□ 1.96
Kdm5cP41230 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC27.28■■□□□ 1.96
Kdm5cP41230 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Kdm5cP41230 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Kdm5cP41230 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Kdm5cP41230 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Kdm5cP41230 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Kdm5cP41230 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
Kdm5cP41230 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC27.26■■□□□ 1.96
Kdm5cP41230 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Kdm5cP41230 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Kdm5cP41230 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC27.26■■□□□ 1.95
Kdm5cP41230 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Kdm5cP41230 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Kdm5cP41230 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
Kdm5cP41230 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC27.26■■□□□ 1.95
Kdm5cP41230 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Kdm5cP41230 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC27.26■■□□□ 1.95
Kdm5cP41230 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Kdm5cP41230 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Kdm5cP41230 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Kdm5cP41230 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC27.25■■□□□ 1.95
Kdm5cP41230 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Kdm5cP41230 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Kdm5cP41230 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Kdm5cP41230 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Kdm5cP41230 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
Kdm5cP41230 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC27.24■■□□□ 1.95
Kdm5cP41230 Gm6345-202ENSMUST00000180900 204 ntBASIC27.24■■□□□ 1.95
Kdm5cP41230 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Kdm5cP41230 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Kdm5cP41230 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Kdm5cP41230 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Kdm5cP41230 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC27.23■■□□□ 1.95
Kdm5cP41230 Gm23634-201ENSMUST00000175071 91 ntBASIC27.23■■□□□ 1.95
Kdm5cP41230 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Kdm5cP41230 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Kdm5cP41230 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Kdm5cP41230 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Kdm5cP41230 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Kdm5cP41230 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Kdm5cP41230 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Kdm5cP41230 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Kdm5cP41230 Gm33142-201ENSMUST00000193913 867 ntBASIC27.22■■□□□ 1.95
Kdm5cP41230 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Kdm5cP41230 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Kdm5cP41230 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Kdm5cP41230 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Kdm5cP41230 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Kdm5cP41230 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Kdm5cP41230 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC27.21■■□□□ 1.95
Kdm5cP41230 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
Kdm5cP41230 Gm38285-201ENSMUST00000192928 922 ntBASIC27.21■■□□□ 1.95
Kdm5cP41230 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Kdm5cP41230 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC27.21■■□□□ 1.95
Kdm5cP41230 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Kdm5cP41230 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Kdm5cP41230 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Kdm5cP41230 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Kdm5cP41230 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms