Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Hdac1O09106 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Hdac1O09106 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Hdac1O09106 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.18■■□□□ 1.14
Hdac1O09106 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.18■■□□□ 1.14
Hdac1O09106 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hdac1O09106 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Hdac1O09106 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Hdac1O09106 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Hdac1O09106 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hdac1O09106 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Hdac1O09106 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hdac1O09106 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hdac1O09106 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hdac1O09106 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hdac1O09106 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hdac1O09106 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC22.16■■□□□ 1.14
Hdac1O09106 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hdac1O09106 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Hdac1O09106 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hdac1O09106 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hdac1O09106 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hdac1O09106 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.15■■□□□ 1.14
Hdac1O09106 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.15■■□□□ 1.14
Hdac1O09106 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.15■■□□□ 1.14
Hdac1O09106 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Hdac1O09106 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hdac1O09106 Gm43702-201ENSMUST00000198772 2546 ntBASIC22.14■■□□□ 1.14
Hdac1O09106 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.14■■□□□ 1.13
Hdac1O09106 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Hdac1O09106 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC22.14■■□□□ 1.13
Hdac1O09106 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Hdac1O09106 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.14■■□□□ 1.13
Hdac1O09106 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22.14■■□□□ 1.13
Hdac1O09106 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC22.13■■□□□ 1.13
Hdac1O09106 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Hdac1O09106 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Hdac1O09106 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hdac1O09106 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hdac1O09106 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hdac1O09106 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hdac1O09106 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
Hdac1O09106 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hdac1O09106 Gm8493-201ENSMUST00000196881 489 ntBASIC22.12■■□□□ 1.13
Hdac1O09106 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hdac1O09106 Fst-202ENSMUST00000223640 2612 ntBASIC22.12■■□□□ 1.13
Hdac1O09106 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hdac1O09106 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hdac1O09106 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Hdac1O09106 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Hdac1O09106 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.11■■□□□ 1.13
Hdac1O09106 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.11■■□□□ 1.13
Hdac1O09106 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.11■■□□□ 1.13
Hdac1O09106 Gm13241-201ENSMUST00000094493 780 ntBASIC22.11■■□□□ 1.13
Hdac1O09106 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Hdac1O09106 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Hdac1O09106 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.11■■□□□ 1.13
Hdac1O09106 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.11■■□□□ 1.13
Hdac1O09106 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hdac1O09106 Gm19439-201ENSMUST00000198195 2273 ntBASIC22.1■■□□□ 1.13
Hdac1O09106 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hdac1O09106 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC22.1■■□□□ 1.13
Hdac1O09106 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Hdac1O09106 Gm38205-201ENSMUST00000192243 258 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms