Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hps1O08983 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hps1O08983 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hps1O08983 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.17■□□□□ 0.34
Hps1O08983 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hps1O08983 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.17■□□□□ 0.34
Hps1O08983 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Gm42642-201ENSMUST00000200683 355 ntBASIC17.17■□□□□ 0.34
Hps1O08983 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Hps1O08983 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hps1O08983 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.16■□□□□ 0.34
Hps1O08983 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.16■□□□□ 0.34
Hps1O08983 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.16■□□□□ 0.34
Hps1O08983 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.16■□□□□ 0.34
Hps1O08983 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.16■□□□□ 0.34
Hps1O08983 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.16■□□□□ 0.34
Hps1O08983 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hps1O08983 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hps1O08983 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.16■□□□□ 0.34
Hps1O08983 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.15■□□□□ 0.34
Hps1O08983 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.15■□□□□ 0.34
Hps1O08983 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.15■□□□□ 0.34
Hps1O08983 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.15■□□□□ 0.34
Hps1O08983 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.15■□□□□ 0.34
Hps1O08983 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hps1O08983 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Hps1O08983 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hps1O08983 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Hps1O08983 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hps1O08983 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Hps1O08983 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hps1O08983 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hps1O08983 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hps1O08983 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.13■□□□□ 0.33
Hps1O08983 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.13■□□□□ 0.33
Hps1O08983 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Hps1O08983 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hps1O08983 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 158.4 ms