Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.56■□□□□ 0.72
Gm11236J3QMS7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm11236J3QMS7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm11236J3QMS7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Zfp783-201ENSMUST00000095946 670 ntBASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm11236J3QMS7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm11236J3QMS7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm11236J3QMS7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Gm11236J3QMS7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm11236J3QMS7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm11236J3QMS7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm11236J3QMS7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm11236J3QMS7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm11236J3QMS7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm11236J3QMS7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.48■□□□□ 0.71
Gm11236J3QMS7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.48■□□□□ 0.71
Gm11236J3QMS7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm11236J3QMS7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms