Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Gm7860-201ENSMUST00000121190 879 ntBASIC10.61□□□□□ -0.71
Herc1E9PZP8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Herc1E9PZP8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Herc1E9PZP8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Herc1E9PZP8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Gm2274-201ENSMUST00000184539 609 ntBASIC10.59□□□□□ -0.71
Herc1E9PZP8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Herc1E9PZP8 Gm8000-201ENSMUST00000188378 592 ntBASIC10.58□□□□□ -0.72
Herc1E9PZP8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Gm5264-201ENSMUST00000190584 848 ntBASIC10.58□□□□□ -0.72
Herc1E9PZP8 Gm18195-201ENSMUST00000207604 706 ntBASIC10.58□□□□□ -0.72
Herc1E9PZP8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Herc1E9PZP8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Gm10418-201ENSMUST00000100943 576 ntBASIC10.57□□□□□ -0.72
Herc1E9PZP8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Herc1E9PZP8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Herc1E9PZP8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms