Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
4933424G06RikA0A140LIP3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
4933424G06RikA0A140LIP3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
4933424G06RikA0A140LIP3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm37352-201ENSMUST00000193908 2181 ntBASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
4933424G06RikA0A140LIP3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
4933424G06RikA0A140LIP3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
4933424G06RikA0A140LIP3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.97■□□□□ 0.63
4933424G06RikA0A140LIP3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm12896-201ENSMUST00000118430 226 ntBASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
4933424G06RikA0A140LIP3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Gm27275-201ENSMUST00000184318 272 ntBASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
4933424G06RikA0A140LIP3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.94■□□□□ 0.62
4933424G06RikA0A140LIP3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms