Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc96Q9CR92 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc96Q9CR92 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ccdc96Q9CR92 Rarb-207ENSMUST00000225921 2756 ntBASIC21.2■□□□□ 0.98
Ccdc96Q9CR92 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc96Q9CR92 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc96Q9CR92 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc96Q9CR92 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc96Q9CR92 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc96Q9CR92 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc96Q9CR92 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc96Q9CR92 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc96Q9CR92 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc96Q9CR92 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc96Q9CR92 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc96Q9CR92 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc96Q9CR92 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc96Q9CR92 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc96Q9CR92 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc96Q9CR92 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc96Q9CR92 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc96Q9CR92 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc96Q9CR92 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc96Q9CR92 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc96Q9CR92 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc96Q9CR92 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc96Q9CR92 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.14■□□□□ 0.97
Ccdc96Q9CR92 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc96Q9CR92 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc96Q9CR92 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc96Q9CR92 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ccdc96Q9CR92 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms