Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Gm12918-201ENSMUST00000120234 636 ntBASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Gm15710-201ENSMUST00000121821 636 ntBASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Gm5075-201ENSMUST00000196916 622 ntBASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Gm4968-201ENSMUST00000071458 858 ntBASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx41Q91VN6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx41Q91VN6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx41Q91VN6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.35■■□□□ 1.01
Ddx41Q91VN6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.35■■□□□ 1.01
Ddx41Q91VN6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.35■■□□□ 1.01
Ddx41Q91VN6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.35■■□□□ 1.01
Ddx41Q91VN6 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.35■■□□□ 1.01
Ddx41Q91VN6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx41Q91VN6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx41Q91VN6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx41Q91VN6 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.33■■□□□ 1.01
Ddx41Q91VN6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx41Q91VN6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ddx41Q91VN6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx41Q91VN6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ddx41Q91VN6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.32■■□□□ 1
Ddx41Q91VN6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ddx41Q91VN6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx41Q91VN6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.31■■□□□ 1
Ddx41Q91VN6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ddx41Q91VN6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ddx41Q91VN6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.31■■□□□ 1
Ddx41Q91VN6 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.31■■□□□ 1
Ddx41Q91VN6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.31■■□□□ 1
Ddx41Q91VN6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
Ddx41Q91VN6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx41Q91VN6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ddx41Q91VN6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx41Q91VN6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.3■■□□□ 1
Ddx41Q91VN6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx41Q91VN6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx41Q91VN6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.3■■□□□ 1
Ddx41Q91VN6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx41Q91VN6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx41Q91VN6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
Ddx41Q91VN6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.29■■□□□ 1
Ddx41Q91VN6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx41Q91VN6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.28■■□□□ 1
Ddx41Q91VN6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.28■■□□□ 1
Ddx41Q91VN6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Ddx41Q91VN6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx41Q91VN6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx41Q91VN6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx41Q91VN6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx41Q91VN6 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.27■■□□□ 1
Ddx41Q91VN6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ddx41Q91VN6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms