Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap2Q8VC34 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Gm6420-201ENSMUST00000193885 723 ntBASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rpap2Q8VC34 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpap2Q8VC34 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.53■□□□□ 0.88
Rpap2Q8VC34 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.53■□□□□ 0.88
Rpap2Q8VC34 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpap2Q8VC34 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpap2Q8VC34 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpap2Q8VC34 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpap2Q8VC34 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.53■□□□□ 0.88
Rpap2Q8VC34 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpap2Q8VC34 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.52■□□□□ 0.87
Rpap2Q8VC34 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpap2Q8VC34 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpap2Q8VC34 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpap2Q8VC34 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Rpap2Q8VC34 Gm42569-201ENSMUST00000200539 472 ntBASIC20.51■□□□□ 0.87
Rpap2Q8VC34 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpap2Q8VC34 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rpap2Q8VC34 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Nespas-201ENSMUST00000143738 1083 ntBASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpap2Q8VC34 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpap2Q8VC34 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rpap2Q8VC34 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpap2Q8VC34 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpap2Q8VC34 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpap2Q8VC34 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpap2Q8VC34 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpap2Q8VC34 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.48■□□□□ 0.87
Rpap2Q8VC34 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpap2Q8VC34 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap2Q8VC34 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap2Q8VC34 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap2Q8VC34 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpap2Q8VC34 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms