Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.72■□□□□ 0.43
SynbQ8BI41 Gm13168-201ENSMUST00000121771 632 ntBASIC17.72■□□□□ 0.43
SynbQ8BI41 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.72■□□□□ 0.43
SynbQ8BI41 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SynbQ8BI41 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SynbQ8BI41 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.72■□□□□ 0.43
SynbQ8BI41 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.72■□□□□ 0.43
SynbQ8BI41 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.71■□□□□ 0.43
SynbQ8BI41 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.71■□□□□ 0.43
SynbQ8BI41 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.71■□□□□ 0.43
SynbQ8BI41 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
SynbQ8BI41 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.71■□□□□ 0.43
SynbQ8BI41 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SynbQ8BI41 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SynbQ8BI41 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SynbQ8BI41 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SynbQ8BI41 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SynbQ8BI41 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.7■□□□□ 0.42
SynbQ8BI41 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SynbQ8BI41 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SynbQ8BI41 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SynbQ8BI41 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SynbQ8BI41 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.69■□□□□ 0.42
SynbQ8BI41 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SynbQ8BI41 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.69■□□□□ 0.42
SynbQ8BI41 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SynbQ8BI41 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynbQ8BI41 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SynbQ8BI41 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SynbQ8BI41 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynbQ8BI41 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.68■□□□□ 0.42
SynbQ8BI41 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SynbQ8BI41 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SynbQ8BI41 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
SynbQ8BI41 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynbQ8BI41 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynbQ8BI41 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SynbQ8BI41 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.67■□□□□ 0.42
SynbQ8BI41 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.67■□□□□ 0.42
SynbQ8BI41 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.67■□□□□ 0.42
SynbQ8BI41 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.67■□□□□ 0.42
SynbQ8BI41 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
SynbQ8BI41 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynbQ8BI41 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.66■□□□□ 0.42
SynbQ8BI41 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynbQ8BI41 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.66■□□□□ 0.42
SynbQ8BI41 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SynbQ8BI41 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 165.1 ms