Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
Rtl1Q7M732 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Rtl1Q7M732 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Rtl1Q7M732 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC33.53■■■□□ 2.96
Rtl1Q7M732 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Rtl1Q7M732 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Rtl1Q7M732 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC33.53■■■□□ 2.96
Rtl1Q7M732 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Rtl1Q7M732 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Rtl1Q7M732 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Rtl1Q7M732 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Rtl1Q7M732 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC33.51■■■□□ 2.96
Rtl1Q7M732 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
Rtl1Q7M732 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Rtl1Q7M732 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC33.51■■■□□ 2.95
Rtl1Q7M732 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Rtl1Q7M732 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Rtl1Q7M732 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Rtl1Q7M732 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
Rtl1Q7M732 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Rtl1Q7M732 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Rtl1Q7M732 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Rtl1Q7M732 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC33.5■■■□□ 2.95
Rtl1Q7M732 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Rtl1Q7M732 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Rtl1Q7M732 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Rtl1Q7M732 Gm2559-201ENSMUST00000201323 363 ntBASIC33.48■■■□□ 2.95
Rtl1Q7M732 AC107452.1-201ENSMUST00000227963 481 ntBASIC33.48■■■□□ 2.95
Rtl1Q7M732 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Rtl1Q7M732 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Rtl1Q7M732 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Rtl1Q7M732 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC33.48■■■□□ 2.95
Rtl1Q7M732 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Rtl1Q7M732 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Rtl1Q7M732 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Rtl1Q7M732 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Rtl1Q7M732 Gm2399-201ENSMUST00000104944 225 ntBASIC33.47■■■□□ 2.95
Rtl1Q7M732 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC33.47■■■□□ 2.95
Rtl1Q7M732 Gm12896-201ENSMUST00000118430 226 ntBASIC33.47■■■□□ 2.95
Rtl1Q7M732 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Rtl1Q7M732 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rtl1Q7M732 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rtl1Q7M732 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rtl1Q7M732 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC33.46■■■□□ 2.95
Rtl1Q7M732 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rtl1Q7M732 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Rtl1Q7M732 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC33.45■■■□□ 2.95
Rtl1Q7M732 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC33.45■■■□□ 2.95
Rtl1Q7M732 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC33.45■■■□□ 2.95
Rtl1Q7M732 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC33.45■■■□□ 2.95
Rtl1Q7M732 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
Rtl1Q7M732 Gm44549-201ENSMUST00000208351 577 ntBASIC33.45■■■□□ 2.94
Rtl1Q7M732 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC33.45■■■□□ 2.94
Rtl1Q7M732 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC33.45■■■□□ 2.94
Rtl1Q7M732 Gm8309-201ENSMUST00000206627 1448 ntBASIC33.44■■■□□ 2.94
Rtl1Q7M732 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Rtl1Q7M732 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Rtl1Q7M732 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Rtl1Q7M732 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Rtl1Q7M732 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC33.43■■■□□ 2.94
Rtl1Q7M732 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Rtl1Q7M732 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC33.43■■■□□ 2.94
Rtl1Q7M732 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Rtl1Q7M732 AC160393.1-201ENSMUST00000218378 1279 ntBASIC33.43■■■□□ 2.94
Rtl1Q7M732 Wnt10b-205ENSMUST00000226846 1204 ntBASIC33.43■■■□□ 2.94
Rtl1Q7M732 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC33.43■■■□□ 2.94
Rtl1Q7M732 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Rtl1Q7M732 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Rtl1Q7M732 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rtl1Q7M732 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC33.42■■■□□ 2.94
Rtl1Q7M732 Gm8520-201ENSMUST00000186517 868 ntBASIC33.42■■■□□ 2.94
Rtl1Q7M732 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rtl1Q7M732 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC33.42■■■□□ 2.94
Rtl1Q7M732 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC33.42■■■□□ 2.94
Rtl1Q7M732 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rtl1Q7M732 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC33.41■■■□□ 2.94
Rtl1Q7M732 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Rtl1Q7M732 Gm15847-201ENSMUST00000121417 1065 ntBASIC33.41■■■□□ 2.94
Rtl1Q7M732 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Rtl1Q7M732 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Rtl1Q7M732 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Rtl1Q7M732 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rtl1Q7M732 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rtl1Q7M732 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rtl1Q7M732 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC33.4■■■□□ 2.94
Rtl1Q7M732 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rtl1Q7M732 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC33.39■■■□□ 2.94
Rtl1Q7M732 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Rtl1Q7M732 Rncr4-201ENSMUST00000194541 2234 ntBASIC33.39■■■□□ 2.94
Rtl1Q7M732 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Rtl1Q7M732 Gm37805-201ENSMUST00000192612 1094 ntBASIC33.39■■■□□ 2.94
Rtl1Q7M732 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Rtl1Q7M732 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms