Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smchd1Q6P5D8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smchd1Q6P5D8 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.61■□□□□ 0.89
Smchd1Q6P5D8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Gm44549-201ENSMUST00000208351 577 ntBASIC20.6■□□□□ 0.89
Smchd1Q6P5D8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smchd1Q6P5D8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smchd1Q6P5D8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Gm12896-201ENSMUST00000118430 226 ntBASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Gm22240-201ENSMUST00000175225 82 ntBASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smchd1Q6P5D8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smchd1Q6P5D8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smchd1Q6P5D8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms