Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.64■□□□□ 0.73
Znf235Q61116 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.64■□□□□ 0.73
Znf235Q61116 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Znf235Q61116 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf235Q61116 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.63■□□□□ 0.73
Znf235Q61116 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.63■□□□□ 0.73
Znf235Q61116 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf235Q61116 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Znf235Q61116 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Znf235Q61116 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.62■□□□□ 0.73
Znf235Q61116 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Znf235Q61116 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Znf235Q61116 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Znf235Q61116 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Znf235Q61116 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Znf235Q61116 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Znf235Q61116 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Znf235Q61116 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Znf235Q61116 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Znf235Q61116 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Znf235Q61116 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Znf235Q61116 Gm5643-201ENSMUST00000117081 966 ntBASIC19.61■□□□□ 0.73
Znf235Q61116 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.61■□□□□ 0.73
Znf235Q61116 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Znf235Q61116 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.61■□□□□ 0.73
Znf235Q61116 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Znf235Q61116 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Znf235Q61116 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.61■□□□□ 0.73
Znf235Q61116 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Znf235Q61116 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Znf235Q61116 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Znf235Q61116 Gm2399-201ENSMUST00000104944 225 ntBASIC19.6■□□□□ 0.73
Znf235Q61116 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.6■□□□□ 0.73
Znf235Q61116 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Znf235Q61116 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Znf235Q61116 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Znf235Q61116 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Znf235Q61116 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Znf235Q61116 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Znf235Q61116 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Znf235Q61116 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.6■□□□□ 0.73
Znf235Q61116 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Znf235Q61116 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Znf235Q61116 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.59■□□□□ 0.73
Znf235Q61116 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Znf235Q61116 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Znf235Q61116 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Znf235Q61116 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Znf235Q61116 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Znf235Q61116 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.58■□□□□ 0.72
Znf235Q61116 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.58■□□□□ 0.72
Znf235Q61116 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.58■□□□□ 0.72
Znf235Q61116 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.58■□□□□ 0.72
Znf235Q61116 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Znf235Q61116 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Znf235Q61116 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.57■□□□□ 0.72
Znf235Q61116 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.57■□□□□ 0.72
Znf235Q61116 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Gm22325-201ENSMUST00000158904 308 ntBASIC19.57■□□□□ 0.72
Znf235Q61116 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.57■□□□□ 0.72
Znf235Q61116 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.57■□□□□ 0.72
Znf235Q61116 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.57■□□□□ 0.72
Znf235Q61116 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Znf235Q61116 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Znf235Q61116 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf235Q61116 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf235Q61116 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf235Q61116 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Znf235Q61116 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms