Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shroom1Q5SX79 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Gm13168-201ENSMUST00000121771 632 ntBASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shroom1Q5SX79 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Shroom1Q5SX79 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Shroom1Q5SX79 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shroom1Q5SX79 Golph3-205ENSMUST00000228671 2842 ntBASIC19.83■□□□□ 0.76
Shroom1Q5SX79 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shroom1Q5SX79 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Trmt13-210ENSMUST00000198454 880 ntBASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shroom1Q5SX79 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.8■□□□□ 0.76
Shroom1Q5SX79 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shroom1Q5SX79 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shroom1Q5SX79 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.78■□□□□ 0.76
Shroom1Q5SX79 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms