Protein–RNA interactions for Protein: P10820

Prf1, Perforin-1, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prf1P10820 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.2■□□□□ 0.66
Prf1P10820 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prf1P10820 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Prf1P10820 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prf1P10820 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prf1P10820 Gm7290-201ENSMUST00000104990 617 ntBASIC19.19■□□□□ 0.66
Prf1P10820 Gm12918-201ENSMUST00000120234 636 ntBASIC19.19■□□□□ 0.66
Prf1P10820 Gm15710-201ENSMUST00000121821 636 ntBASIC19.19■□□□□ 0.66
Prf1P10820 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prf1P10820 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.19■□□□□ 0.66
Prf1P10820 Gm5075-201ENSMUST00000196916 622 ntBASIC19.19■□□□□ 0.66
Prf1P10820 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.19■□□□□ 0.66
Prf1P10820 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Prf1P10820 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prf1P10820 Gm20049-201ENSMUST00000219950 730 ntBASIC19.19■□□□□ 0.66
Prf1P10820 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.19■□□□□ 0.66
Prf1P10820 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.19■□□□□ 0.66
Prf1P10820 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Prf1P10820 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prf1P10820 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.19■□□□□ 0.66
Prf1P10820 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.19■□□□□ 0.66
Prf1P10820 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prf1P10820 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prf1P10820 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prf1P10820 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prf1P10820 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Prf1P10820 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Prf1P10820 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.18■□□□□ 0.66
Prf1P10820 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.18■□□□□ 0.66
Prf1P10820 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prf1P10820 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Prf1P10820 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.17■□□□□ 0.66
Prf1P10820 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.17■□□□□ 0.66
Prf1P10820 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Prf1P10820 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Prf1P10820 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.17■□□□□ 0.66
Prf1P10820 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prf1P10820 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.16■□□□□ 0.66
Prf1P10820 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.16■□□□□ 0.66
Prf1P10820 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.16■□□□□ 0.66
Prf1P10820 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.16■□□□□ 0.66
Prf1P10820 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Prf1P10820 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Prf1P10820 BC021767-201ENSMUST00000126387 1716 ntBASIC19.16■□□□□ 0.66
Prf1P10820 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prf1P10820 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prf1P10820 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prf1P10820 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.15■□□□□ 0.66
Prf1P10820 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.15■□□□□ 0.66
Prf1P10820 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Prf1P10820 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prf1P10820 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Prf1P10820 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prf1P10820 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prf1P10820 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prf1P10820 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Prf1P10820 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Prf1P10820 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Prf1P10820 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Gm6365-201ENSMUST00000054711 744 ntBASIC19.14■□□□□ 0.65
Prf1P10820 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.14■□□□□ 0.65
Prf1P10820 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prf1P10820 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms