Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Gm10231-201ENSMUST00000181584 441 ntBASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Gm43799-201ENSMUST00000201845 579 ntBASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Gm10175-202ENSMUST00000208752 441 ntBASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Gm12106-201ENSMUST00000116006 1200 ntBASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Rab3c-203ENSMUST00000224180 967 ntBASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lhx6Q9R1R0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Lhx6Q9R1R0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Gm12896-201ENSMUST00000118430 226 ntBASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Gm26524-201ENSMUST00000192339 390 ntBASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx6Q9R1R0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Gm13146-201ENSMUST00000118508 780 ntBASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx6Q9R1R0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Gm44882-201ENSMUST00000205702 802 ntBASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx6Q9R1R0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Gm25925-201ENSMUST00000158314 306 ntBASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx6Q9R1R0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Gm37319-201ENSMUST00000193500 636 ntBASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx6Q9R1R0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms