Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgn5Q9JL35 Serp2-204ENSMUST00000228055 705 ntBASIC21.11■□□□□ 0.97
Hmgn5Q9JL35 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgn5Q9JL35 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgn5Q9JL35 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgn5Q9JL35 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgn5Q9JL35 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgn5Q9JL35 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgn5Q9JL35 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Hmgn5Q9JL35 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.08■□□□□ 0.97
Hmgn5Q9JL35 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgn5Q9JL35 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgn5Q9JL35 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgn5Q9JL35 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgn5Q9JL35 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Hmgn5Q9JL35 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.08■□□□□ 0.96
Hmgn5Q9JL35 Cap2-205ENSMUST00000225824 1634 ntBASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgn5Q9JL35 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgn5Q9JL35 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgn5Q9JL35 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Hmgn5Q9JL35 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgn5Q9JL35 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgn5Q9JL35 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgn5Q9JL35 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgn5Q9JL35 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgn5Q9JL35 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgn5Q9JL35 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms