Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb2Q91Y00 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhb2Q91Y00 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhb2Q91Y00 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Gm12933-201ENSMUST00000120203 872 ntBASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhb2Q91Y00 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhb2Q91Y00 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Gm6365-201ENSMUST00000054711 744 ntBASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhb2Q91Y00 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Mir5133-201ENSMUST00000174955 77 ntBASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Gm29257-201ENSMUST00000186115 639 ntBASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhb2Q91Y00 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb2Q91Y00 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Gm7290-201ENSMUST00000104990 617 ntBASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Gm12918-201ENSMUST00000120234 636 ntBASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Gm15710-201ENSMUST00000121821 636 ntBASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Gm5075-201ENSMUST00000196916 622 ntBASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb2Q91Y00 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms