Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpsf7Q8BTV2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpsf7Q8BTV2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cpsf7Q8BTV2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cpsf7Q8BTV2 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.71■□□□□ 0.58
Cpsf7Q8BTV2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpsf7Q8BTV2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpsf7Q8BTV2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.68■□□□□ 0.58
Cpsf7Q8BTV2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf7Q8BTV2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf7Q8BTV2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf7Q8BTV2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf7Q8BTV2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpsf7Q8BTV2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpsf7Q8BTV2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf7Q8BTV2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms