Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Xrn1P97789 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Xrn1P97789 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Xrn1P97789 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC27.19■■□□□ 1.94
Xrn1P97789 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Xrn1P97789 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Xrn1P97789 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC27.18■■□□□ 1.94
Xrn1P97789 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Xrn1P97789 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Xrn1P97789 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Xrn1P97789 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Xrn1P97789 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Xrn1P97789 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC27.17■■□□□ 1.94
Xrn1P97789 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Xrn1P97789 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Xrn1P97789 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Xrn1P97789 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Xrn1P97789 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Xrn1P97789 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Xrn1P97789 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Xrn1P97789 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Xrn1P97789 Gm6433-201ENSMUST00000118634 875 ntBASIC27.16■■□□□ 1.94
Xrn1P97789 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC27.16■■□□□ 1.94
Xrn1P97789 Gm3375-201ENSMUST00000203929 796 ntBASIC27.16■■□□□ 1.94
Xrn1P97789 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Xrn1P97789 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Xrn1P97789 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Xrn1P97789 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Xrn1P97789 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC27.15■■□□□ 1.94
Xrn1P97789 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Xrn1P97789 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Xrn1P97789 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC27.15■■□□□ 1.94
Xrn1P97789 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Xrn1P97789 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC27.14■■□□□ 1.94
Xrn1P97789 Arhgef4-208ENSMUST00000211073 171 ntBASIC27.14■■□□□ 1.94
Xrn1P97789 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Xrn1P97789 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Xrn1P97789 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
Xrn1P97789 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Xrn1P97789 Gm8309-201ENSMUST00000206627 1448 ntBASIC27.13■■□□□ 1.93
Xrn1P97789 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Xrn1P97789 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
Xrn1P97789 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC27.13■■□□□ 1.93
Xrn1P97789 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Xrn1P97789 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Xrn1P97789 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC27.13■■□□□ 1.93
Xrn1P97789 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC27.13■■□□□ 1.93
Xrn1P97789 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC27.12■■□□□ 1.93
Xrn1P97789 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Xrn1P97789 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
Xrn1P97789 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Xrn1P97789 Flg-201ENSMUST00000050758 1488 ntBASIC27.12■■□□□ 1.93
Xrn1P97789 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Xrn1P97789 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC27.12■■□□□ 1.93
Xrn1P97789 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Xrn1P97789 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Xrn1P97789 Gm18025-201ENSMUST00000221733 862 ntBASIC27.12■■□□□ 1.93
Xrn1P97789 Mtag2-201ENSMUST00000058665 714 ntBASIC27.12■■□□□ 1.93
Xrn1P97789 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Xrn1P97789 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Xrn1P97789 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Xrn1P97789 Gm7889-201ENSMUST00000185591 958 ntBASIC27.11■■□□□ 1.93
Xrn1P97789 Zfp783-201ENSMUST00000095946 670 ntBASIC27.11■■□□□ 1.93
Xrn1P97789 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Xrn1P97789 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC27.11■■□□□ 1.93
Xrn1P97789 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Xrn1P97789 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Xrn1P97789 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Xrn1P97789 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Xrn1P97789 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC27.1■■□□□ 1.93
Xrn1P97789 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Xrn1P97789 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC27.1■■□□□ 1.93
Xrn1P97789 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Xrn1P97789 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Xrn1P97789 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC27.09■■□□□ 1.93
Xrn1P97789 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Xrn1P97789 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Xrn1P97789 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Xrn1P97789 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Xrn1P97789 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Xrn1P97789 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Xrn1P97789 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
Xrn1P97789 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC27.08■■□□□ 1.93
Xrn1P97789 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
Xrn1P97789 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC27.08■■□□□ 1.93
Xrn1P97789 Gm43006-201ENSMUST00000197702 1602 ntBASIC27.08■■□□□ 1.93
Xrn1P97789 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
Xrn1P97789 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Xrn1P97789 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Xrn1P97789 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Xrn1P97789 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Xrn1P97789 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Xrn1P97789 Gm45560-201ENSMUST00000211492 1472 ntBASIC27.06■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms