Protein–RNA interactions for Protein: P10820

Prf1, Perforin-1, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prf1P10820 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prf1P10820 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prf1P10820 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prf1P10820 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prf1P10820 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prf1P10820 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.27■□□□□ 0.68
Prf1P10820 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prf1P10820 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Prf1P10820 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prf1P10820 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.27■□□□□ 0.68
Prf1P10820 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prf1P10820 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prf1P10820 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prf1P10820 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Prf1P10820 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prf1P10820 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prf1P10820 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prf1P10820 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prf1P10820 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prf1P10820 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prf1P10820 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prf1P10820 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.26■□□□□ 0.67
Prf1P10820 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.26■□□□□ 0.67
Prf1P10820 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prf1P10820 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Prf1P10820 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.26■□□□□ 0.67
Prf1P10820 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prf1P10820 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.26■□□□□ 0.67
Prf1P10820 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Prf1P10820 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prf1P10820 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prf1P10820 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.25■□□□□ 0.67
Prf1P10820 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.25■□□□□ 0.67
Prf1P10820 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.25■□□□□ 0.67
Prf1P10820 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prf1P10820 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.25■□□□□ 0.67
Prf1P10820 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.25■□□□□ 0.67
Prf1P10820 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Prf1P10820 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prf1P10820 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prf1P10820 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.25■□□□□ 0.67
Prf1P10820 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prf1P10820 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prf1P10820 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prf1P10820 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prf1P10820 Mir6982-201ENSMUST00000184354 68 ntBASIC19.24■□□□□ 0.67
Prf1P10820 Gm10812-201ENSMUST00000099864 546 ntBASIC19.24■□□□□ 0.67
Prf1P10820 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.24■□□□□ 0.67
Prf1P10820 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prf1P10820 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Prf1P10820 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Prf1P10820 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prf1P10820 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Gm5408-201ENSMUST00000197998 747 ntBASIC19.23■□□□□ 0.67
Prf1P10820 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prf1P10820 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Gm13148-201ENSMUST00000118892 745 ntBASIC19.22■□□□□ 0.67
Prf1P10820 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.22■□□□□ 0.67
Prf1P10820 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.22■□□□□ 0.67
Prf1P10820 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Prf1P10820 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prf1P10820 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.21■□□□□ 0.67
Prf1P10820 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.21■□□□□ 0.67
Prf1P10820 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Prf1P10820 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prf1P10820 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prf1P10820 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prf1P10820 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Prf1P10820 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prf1P10820 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prf1P10820 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prf1P10820 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prf1P10820 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prf1P10820 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Prf1P10820 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms