Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx6Q9R1R0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx6Q9R1R0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lhx6Q9R1R0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx6Q9R1R0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Lhx6Q9R1R0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx6Q9R1R0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx6Q9R1R0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx6Q9R1R0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Gm28196-201ENSMUST00000187719 640 ntBASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lhx6Q9R1R0 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lhx6Q9R1R0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms