Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rsph3bQ9DA80 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph3bQ9DA80 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph3bQ9DA80 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rsph3bQ9DA80 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph3bQ9DA80 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph3bQ9DA80 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rsph3bQ9DA80 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rsph3bQ9DA80 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Gm12527-201ENSMUST00000117967 564 ntBASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Rsph3bQ9DA80 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Gm20760-201ENSMUST00000179197 648 ntBASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph3bQ9DA80 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph3bQ9DA80 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph3bQ9DA80 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Gm20049-201ENSMUST00000219950 730 ntBASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Rsph3bQ9DA80 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms