Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upb1Q8VC97 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upb1Q8VC97 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upb1Q8VC97 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upb1Q8VC97 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Upb1Q8VC97 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.46■□□□□ 0.87
Upb1Q8VC97 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Upb1Q8VC97 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Upb1Q8VC97 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Upb1Q8VC97 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upb1Q8VC97 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Upb1Q8VC97 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Upb1Q8VC97 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Upb1Q8VC97 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.45■□□□□ 0.86
Upb1Q8VC97 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Upb1Q8VC97 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Upb1Q8VC97 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.44■□□□□ 0.86
Upb1Q8VC97 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Upb1Q8VC97 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.44■□□□□ 0.86
Upb1Q8VC97 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Upb1Q8VC97 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.43■□□□□ 0.86
Upb1Q8VC97 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.43■□□□□ 0.86
Upb1Q8VC97 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Upb1Q8VC97 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.42■□□□□ 0.86
Upb1Q8VC97 Gm26524-201ENSMUST00000192339 390 ntBASIC20.42■□□□□ 0.86
Upb1Q8VC97 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Upb1Q8VC97 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Upb1Q8VC97 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Upb1Q8VC97 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.4■□□□□ 0.86
Upb1Q8VC97 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.4■□□□□ 0.86
Upb1Q8VC97 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Upb1Q8VC97 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Upb1Q8VC97 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Upb1Q8VC97 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Upb1Q8VC97 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms