Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8CDN1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.44■□□□□ 0.7
Q8CDN1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.44■□□□□ 0.7
Q8CDN1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.44■□□□□ 0.7
Q8CDN1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.44■□□□□ 0.7
Q8CDN1 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.44■□□□□ 0.7
Q8CDN1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Q8CDN1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8CDN1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Q8CDN1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.43■□□□□ 0.7
Q8CDN1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Q8CDN1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q8CDN1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Q8CDN1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q8CDN1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q8CDN1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.42■□□□□ 0.7
Q8CDN1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.42■□□□□ 0.7
Q8CDN1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q8CDN1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q8CDN1 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.42■□□□□ 0.7
Q8CDN1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q8CDN1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
Q8CDN1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Q8CDN1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.41■□□□□ 0.7
Q8CDN1 Gm20049-201ENSMUST00000219950 730 ntBASIC19.41■□□□□ 0.7
Q8CDN1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.41■□□□□ 0.7
Q8CDN1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q8CDN1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q8CDN1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.4■□□□□ 0.7
Q8CDN1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8CDN1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8CDN1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q8CDN1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q8CDN1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Q8CDN1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Q8CDN1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Q8CDN1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Q8CDN1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Q8CDN1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Q8CDN1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.39■□□□□ 0.69
Q8CDN1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Q8CDN1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.39■□□□□ 0.69
Q8CDN1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Q8CDN1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q8CDN1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8CDN1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8CDN1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Q8CDN1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Q8CDN1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q8CDN1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.38■□□□□ 0.69
Q8CDN1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q8CDN1 Rab3c-203ENSMUST00000224180 967 ntBASIC19.38■□□□□ 0.69
Q8CDN1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Q8CDN1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q8CDN1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Q8CDN1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Q8CDN1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.37■□□□□ 0.69
Q8CDN1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q8CDN1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q8CDN1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms