Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynbQ8BI41 Gm12527-201ENSMUST00000117967 564 ntBASIC17.85■□□□□ 0.45
SynbQ8BI41 Gm13148-201ENSMUST00000118892 745 ntBASIC17.85■□□□□ 0.45
SynbQ8BI41 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.85■□□□□ 0.45
SynbQ8BI41 Gm8520-201ENSMUST00000186517 868 ntBASIC17.85■□□□□ 0.45
SynbQ8BI41 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.85■□□□□ 0.45
SynbQ8BI41 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynbQ8BI41 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynbQ8BI41 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynbQ8BI41 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynbQ8BI41 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynbQ8BI41 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.84■□□□□ 0.45
SynbQ8BI41 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SynbQ8BI41 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynbQ8BI41 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.84■□□□□ 0.45
SynbQ8BI41 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SynbQ8BI41 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynbQ8BI41 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SynbQ8BI41 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SynbQ8BI41 Gm5408-201ENSMUST00000197998 747 ntBASIC17.83■□□□□ 0.44
SynbQ8BI41 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynbQ8BI41 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynbQ8BI41 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynbQ8BI41 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynbQ8BI41 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SynbQ8BI41 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SynbQ8BI41 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.82■□□□□ 0.44
SynbQ8BI41 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Gm6365-201ENSMUST00000054711 744 ntBASIC17.82■□□□□ 0.44
SynbQ8BI41 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SynbQ8BI41 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SynbQ8BI41 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.81■□□□□ 0.44
SynbQ8BI41 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.81■□□□□ 0.44
SynbQ8BI41 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.81■□□□□ 0.44
SynbQ8BI41 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynbQ8BI41 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SynbQ8BI41 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SynbQ8BI41 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Golph3-205ENSMUST00000228671 2842 ntBASIC17.8■□□□□ 0.44
SynbQ8BI41 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SynbQ8BI41 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.8■□□□□ 0.44
SynbQ8BI41 Gm38205-201ENSMUST00000192243 258 ntBASIC17.8■□□□□ 0.44
SynbQ8BI41 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SynbQ8BI41 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SynbQ8BI41 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynbQ8BI41 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.79■□□□□ 0.44
SynbQ8BI41 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.79■□□□□ 0.44
SynbQ8BI41 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.79■□□□□ 0.44
SynbQ8BI41 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.79■□□□□ 0.44
SynbQ8BI41 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SynbQ8BI41 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms