Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Gm22325-201ENSMUST00000158904 308 ntBASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp6nlQ80XC3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp6nlQ80XC3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Usp6nlQ80XC3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Gm10698-201ENSMUST00000182663 604 ntBASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Gm7977-201ENSMUST00000193787 748 ntBASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp6nlQ80XC3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Gm18666-201ENSMUST00000190039 958 ntBASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Usp6nlQ80XC3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp6nlQ80XC3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp6nlQ80XC3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp6nlQ80XC3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp6nlQ80XC3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp6nlQ80XC3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Gm2399-201ENSMUST00000104944 225 ntBASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Gm715-201ENSMUST00000117865 831 ntBASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp6nlQ80XC3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp6nlQ80XC3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms