Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf1aP25118 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf1aP25118 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tnfrsf1aP25118 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.76■□□□□ 0.11
Tnfrsf1aP25118 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Gm43173-201ENSMUST00000202246 593 ntBASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Tnfrsf1aP25118 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Golph3-205ENSMUST00000228671 2842 ntBASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tnfrsf1aP25118 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Gm45417-201ENSMUST00000209533 758 ntBASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tnfrsf1aP25118 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Gm27801-201ENSMUST00000184174 223 ntBASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.72■□□□□ 0.11
Tnfrsf1aP25118 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tnfrsf1aP25118 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Tnfrsf1aP25118 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tnfrsf1aP25118 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms