Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.36■□□□□ 0.37
Hps1O08983 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hps1O08983 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.35■□□□□ 0.37
Hps1O08983 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.35■□□□□ 0.37
Hps1O08983 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hps1O08983 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hps1O08983 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Hps1O08983 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Rarb-207ENSMUST00000225921 2756 ntBASIC17.34■□□□□ 0.37
Hps1O08983 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hps1O08983 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Gm7291-201ENSMUST00000199147 382 ntBASIC17.34■□□□□ 0.37
Hps1O08983 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.34■□□□□ 0.37
Hps1O08983 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hps1O08983 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Hps1O08983 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hps1O08983 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hps1O08983 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Hps1O08983 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hps1O08983 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hps1O08983 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Hps1O08983 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hps1O08983 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Hps1O08983 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.33■□□□□ 0.36
Hps1O08983 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Hps1O08983 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hps1O08983 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hps1O08983 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Hps1O08983 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hps1O08983 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hps1O08983 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hps1O08983 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.32■□□□□ 0.36
Hps1O08983 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hps1O08983 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hps1O08983 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.32■□□□□ 0.36
Hps1O08983 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hps1O08983 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hps1O08983 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hps1O08983 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.32■□□□□ 0.36
Hps1O08983 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hps1O08983 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hps1O08983 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hps1O08983 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.31■□□□□ 0.36
Hps1O08983 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.31■□□□□ 0.36
Hps1O08983 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Hps1O08983 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Hps1O08983 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Hps1O08983 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hps1O08983 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hps1O08983 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.3■□□□□ 0.36
Hps1O08983 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.3■□□□□ 0.36
Hps1O08983 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.3■□□□□ 0.36
Hps1O08983 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 659.5 ms